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Applying Graph Theory to Context-Dependent Connectivity

With the emergence of high-powered computing resources there has been substantial work in developing methods to understand the networks of the resting brain. However, work to understand the same...

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Dynamics of the Resting State

With the emergence large fMRI datasets and advanced analysis methods, now is the time to explore the dynamics of connectivity. While there have been several proposals about how to this recently, they...

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The Global Alzheimer’s Association Interactive Network (GAAIN)

A Global Cooperative of Sharing, Investigation, & Discovery The Global Alzheimer’s Association Interactive Network (GAAIN) is a collaborative project that will provide researchers around the globe...

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Data-sharing as Competitive Display

The biggest problem facing functional imaging science today is the culture of functional imaging science. Data-hoarding continues to be a source of cultural capital. Younger researchers fear that by...

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R-fMRI Based Tissue Classification

Developing functional imaging based markers of tissue type (GM, WM, CSF) has potential applications for assessing human brain function and/or image quality. This project aims to develop an R-fMRI based...

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Decoding Mental States from Human Brain Activity

Summary This project is rather content-related than highly methodical. However, it offers a problem that can be fully solved during Brainhack 2012, if it is solveable at all. And it can open up a...

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C-PAC (Configurable Pipeline for the Analysis of Connectomes)

SUMMARY: Pipeline implementation, execution and comparison for functional connectomics remains a key challenge for novice and expert investigators alike. In order to address this challenge, the INDI...

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Cerebellum maps

Investigating the cerebellar anatomy and functional connectivity requires high-resolution information. We aim to develop a pipeline to generate cerebellar surface maps by using a high-resolution 7T...

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Music Dynamics

Several fMRI studies reported activations in primary auditory and subcortical brain regions when comparing the processing of pleasant and unpleasant music excerpts. However, the potential temporal...

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The 24-Hour Project

The goal of this project was to complete a task-based fMRI experiment from conception to manuscript in a 24 hour period. While we did not meet this goal (primarily limited by administrative issues that...

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Integrating NIDM and Research Objects (RO)

Summary: NIDM is a data sharing model that’s being built to capture details of brain imaging data, analysis and results. ResearchObjects are containers to capture publications, data, workflows. The...

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Re-architecting Nipype

Summary: A brainstorming + proof of concept implementations for the next evolution of Nipype (support for py3k, simpler semantic model, CI testing with testkraut, integration with biopython, automated...

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Interactive IPython notebooks for brain imaging analysis

Summary: This project will build on a starting set of IPython notebooks to replace BIPS as a environment for scalable, reproducible analysis and interactive exploration of data. The project will also...

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NeuroSynth Bibliometrics

Summary: Bibliometrics, which explores citation practices in the scientific literature, offers an empirical entry point for understanding research communities. By incorporating information about...

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LORIS

Summary: Longitudinal Online Research and Imaging System (LORIS ; Das et al., 2011) is a modular and extensible web-based data management system that integrates all aspects of a multi-center study:...

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BrainSpell Tagging Sprint

Summary: More than 1 neuroimaging paper is published every hour. But we can keep up with the literature if we do it all together! BrainSpell is a web portal where we can annotate the papers extracted...

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neurostars.org

Summary: As part of INCF’s Google Summer of Code, neurostars.org, a question and answer site will incorporate new features: https://github.com/brainstorm/biostar-central/issues?state=open A semantic...

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SpinalCordHack 2014

Summary: To follow close on the ISMRM meeting in Milan, we are inviting participants to the first spinal cord hacking event. This half day event will take place near the conference venue on Friday May...

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Data sharing: Making it work

Summary: Brain imaging lags behind other disciplines in data sharing. But to make data sharing in neuroimaging commonplace we need the coordination of many different players. The purpose of this...

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Nipype for XNAT

Summary: Nipype has the potential to be a great feature in XNAT. For this project, we will add UI and infrastructure in XNAT to manage and run nipype pipelines. We will also add new capabilities in...

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